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Publicaciones recientes - CorpoGen
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Proteorhodopsin-like
genes present in thermoacidophilic high mountain microbial communities.
Bohorquez LC, Ruiz-Pérez CA, Zambrano MM.
Appl Environ Microbiol. 2012 Aug 31. [Epub ahead
of print] PMID: 22941077 [PubMed - as supplied by publisher]
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Comparative analysis of
diguanylate cyclase and phosphodiesterase genes in Klebsiella pneumoniae.
Cruz DP, Huertas MG, Lozano M, Zárate L, Zambrano MM.
BMC Microbiol. 2012 Jul 9;12:139. PMID: 22776320 [PubMed
- in process]
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Analysis of theIS-seq: a novel high throughput
survey of in vivo IS6110 transposition in multiple Mycobacterium
tuberculosis genomes.
Reyes A, Sandoval A, Cubillos-Ruiz A, Varley KE, Hernández-Neuta I,
Samper S, Martín C, Garcia MJ, Ritacco V, López L, Robledo J, Zambrano
MM Mmz, Mitra RD, Del Portillo P.
BMC Genomics. 2012 Jun 15;13(1):249.
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Analysis of the microbial gene landscape and
transcriptome for aromatic pollutants and alkane degradation using a
novel internally calibrated microarray system. Vilchez-Vargas R, Geffers
R, Suárez-Diez M, Conte I, Waliczek A, Kaser VS, Kralova M, Junca H,
Pieper DH.
Environ Microbiol. 2012 Apr 20. doi:
10.1111/j.1462-2920.2012.02752.x.
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"Genomic Variability of Mycobacterium
tuberculosis" in: Understanding Tuberculosis
Zambrano MM, Hernández-Neuta G, Hernández-Neuta I, Sandoval A,
Cubillos-Ruiz A, Reyes A, Del Portillo P. Deciphering the Secret
Life of the Bacilli, ISBN 978-953-307-946-2, Ed Pere-Joan Cardona.
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Gulosibacter molinativorax
ON4T molinate hydrolase,
a novel cobalt-dependent amidohydrolase.
Duarte M, Ferreira-da-Silva F, Lünsdorf H, Junca H, Gales L, Pieper DH,
Nunes OC.
J Bacteriol. 2011 Oct;193(20):5810-6. Epub 2011 Aug 12.
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Alignment of multiple complete genomes
suggests that gene rearrangements may contribute towards the speciation
of Mycobacteria.
Garcia-Betancur
JC, Menendez MC, Del Portillo P, Garcia MJ.
Infect Genet Evol. 2011 Oct 8. [Epub ahead of print]
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Genome sequences of Alicycliphilus denitrificans
strains BC and K601T.
Oosterkamp MJ, Veuskens T, Plugge CM, Langenhoff AA, Gerritse J,
van Berkel WJ, Pieper DH, Junca H, Goodwin LA, Daligault HE,
Bruce DC, Detter JC, Tapia R, Han CS, Land ML, Hauser LJ, Smidt
H, Stams AJ.
J Bacteriol. 2011 Sep;193(18):5028-9. Epub 2011 Jul 8.
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In-depth Characterization via Complementing Culture-Independent
Approaches of the Microbial Community in an Acidic Hot Spring of the
Colombian Andes.
Bohorquez LC, Delgado-Serrano L, López
G, Osorio-Forero C, Klepac-Ceraj V, Kolter R, Junca H, Baena S, Zambrano
MM.
Microb Ecol. 2012 Jan;63(1):103-15. Epub 2011 Sep 27.
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Multicentre laboratory validation of the
colorimetric redox indicator (CRI) assay for the rapid detection of
extensively drug-resistant (XDR) Mycobacterium tuberculosis.
Martin A, Paasch F, Docx S, Fissette K, Imperiale B, Ribón W, González
LA, Werngren J, Engström A, Skenders G, Juréen P, Hoffner S, Del
Portillo P, Morcillo N, Palomino JC.
J Antimicrob Chemother. 2011 Apr;66(4):827-33. Epub 2011 Jan 19.
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Evaluation of the BD MGIT TBc Identification Test (TBc ID),
a rapid chromatographic immunoassay for the detection of Mycobacterium
tuberculosis complex from liquid culture.
Martin A, Bombeeck D, Fissette K, de Rijk P, Hernández-Neuta I, Del
Portillo P, Palomino JC.
J Microbiol Methods. 2011 Feb;84(2):255-7. Epub 2010 Dec 16.
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Metabolic networks, microbial ecology and 'omics'
technologies: towards understanding in situ biodegradation processes.
Vilchez-Vargas R, Junca H, Pieper DH.
Environ Microbiol. 2010 Dec;12(12):3089-104. doi:
10.1111/j.1462-2920.2010.02340.x. Epub 2010 Sep 23. Review.
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Rifampin-isoniazid oligonucleotide typing: an alternative
format for rapid detection of multidrug-resistant Mycobacterium
tuberculosis.
Hernández-Neuta I, Varela A, Martin A, von Groll A, Jureen P, López B,
Imperiale B, Sķenders G, Ritacco V, Hoffner S, Morcillo N, Palomino JC,
Del Portillo P.
J Clin Microbiol. 2010 Dec;48(12):4386-91. Epub 2010 Sep 29.
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Mangrove microniches determine the structural and
functional diversity of enriched petroleum hydrocarbon-degrading
consortia.
Gomes NC, Flocco CG, Costa R, Junca H, Vilchez R, Pieper DH,
Krögerrecklenfort E, Paranhos R, Mendonça-Hagler LC, Smalla K.
FEMS Microbiol Ecol. 2010 Nov;74(2):276-90. doi:
10.1111/j.1574-6941.2010.00962.x. Epub 2010 Aug 31.
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Genomic signatures of the haarlem lineage of Mycobacterium
tuberculosis: implications of strain genetic variation in drug and
vaccine development.
Cubillos-Ruiz A, Sandoval A, Ritacco V, López B, Robledo J, Correa N,
Hernandez-Neuta I, Zambrano MM, Del Portillo P.
J Clin Microbiol. 2010 Oct;48(10):3614-23. Epub 2010 Jul 14.
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[Comparative analysis of six Mycobacterium
tuberculosis complex genomes].
Chaves D, Sandoval A, Rodríguez L, García JC, Restrepo S, Zambrano MM.
Biomedica. 2010 Jan;30(1):23-31. Spanish.
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Metagenomics reveals diversity and abundance of
meta-cleavage pathways in microbial communities from soil highly
contaminated with jet fuel under air-sparging bioremediation.
Brennerova MV, Josefiova J, Brenner V, Pieper DH, Junca H.
Environ Microbiol. 2009 Sep;11(9):2216-27. Epub 2009 Feb 19.
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[Distribution of potentially
nitrogen-fixing bacteria and its relationship with physicochemical
parameters in soils with three vegetation types in the southern
Colombian Amazon region].
Mantilla-Paredes AJ, Cardona GI, Peña-Venegas CP, Murcia U, Rodríguez M,
Zambrano MM.
Rev Biol Trop. 2009 Dec;57(4):915-27. Spanish.
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Computational biology in Colombia.
Restrepo S, Pinzón A, Rodríguez-R LM, Sierra R, Grajales A, Bernal A,
Barreto E, Moreno PA, Zambrano MM, Cristancho M, González A, Castro H.
PLoS Comput Biol. 2009 Oct;5(10):e1000535. Epub 2009 Oct 30. Review. No
abstract available.
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Enhancement of the microbial community biomass and
diversity during air sparging bioremediation of a soil highly
contaminated with kerosene and BTEX.
Kabelitz N, Machackova J, Imfeld G, Brennerova M, Pieper DH, Heipieper
HJ, Junca H.
Appl Microbiol Biotechnol. 2009 Mar;82(3):565-77. Epub 2009 Jan 27.